Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mrna 3-end processing factor | SAMN04487898_10551 | Not Available | Positive | 2135623 - 2136564 | 35804.3 |
| hypothetical protein | SAMN04487898_10552 | Not Available | Positive | 2136564 - 2136722 | 6073.26 |
| dna-binding transcriptional regulator, marr family | SAMN04487898_10553 | Not Available | Positive | 2136734 - 2137183 | 16869.7 |
| zinc transporter zupt | SAMN04487898_10554 | Not Available | Negative | 2137180 - 2137917 | 26727.2 |
| undecaprenyl-diphosphatase | SAMN04487898_10555 | Not Available | Negative | 2137917 - 2138480 | 21480.9 |
| methyltransferase domain-containing protein | SAMN04487898_10556 | Not Available | Negative | 2138477 - 2139208 | 28616.2 |
| phosphomannomutase | SAMN04487898_10557 | Not Available | Positive | 2139379 - 2140767 | 50093.4 |
| cysteine desulfurase | SAMN04487898_10558 | Not Available | Positive | 2140774 - 2141922 | 42177.4 |
| hypothetical protein | SAMN04487898_10559 | Not Available | Positive | 2141994 - 2142257 | 9981.79 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04487898_10560 | Not Available | Negative | 2142323 - 2143168 | 31158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

