Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04487898_10541 | Not Available | Positive | 2126198 - 2127592 | 51414.1 |
| peroxiredoxin | SAMN04487898_10542 | Not Available | Positive | 2127615 - 2128724 | 40885.0 |
| protein of unknown function | SAMN04487898_10543 | Not Available | Negative | 2128787 - 2129116 | 13047.1 |
| atp-binding cassette, subfamily b | SAMN04487898_10544 | Not Available | Negative | 2129185 - 2130975 | 67928.9 |
| leucine dehydrogenase | SAMN04487898_10545 | Not Available | Positive | 2131088 - 2132176 | 38878.9 |
| nusb antitermination factor | SAMN04487898_10546 | Not Available | Positive | 2132210 - 2133160 | 36697.3 |
| protein of unknown function | SAMN04487898_10547 | Not Available | Positive | 2133167 - 2133634 | 16229.2 |
| preprotein translocase subunit yajc | SAMN04487898_10548 | Not Available | Positive | 2133655 - 2133978 | 11686.8 |
| ybbr-like protein | SAMN04487898_10549 | Not Available | Positive | 2134083 - 2135030 | 36579.1 |
| dephospho-coa kinase | SAMN04487898_10550 | Not Available | Positive | 2135030 - 2135626 | 21907.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

