Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN04487898_10531 | Not Available | Positive | 2106918 - 2109761 | 106072.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10532 | Not Available | Positive | 2110703 - 2111275 | 22500.3 |
| fecr family protein | SAMN04487898_10533 | Not Available | Positive | 2111376 - 2112551 | 43869.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10534 | Not Available | Positive | 2112791 - 2116444 | 135781.0 |
| susd family protein | SAMN04487898_10535 | Not Available | Positive | 2116457 - 2117911 | 53778.1 |
| thioredoxin-like | SAMN04487898_10536 | Not Available | Positive | 2118017 - 2119207 | 45040.2 |
| thioredoxin-like | SAMN04487898_10537 | Not Available | Positive | 2119291 - 2120475 | 44813.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10538 | Not Available | Positive | 2120778 - 2121371 | 23168.0 |
| fecr family protein | SAMN04487898_10539 | Not Available | Positive | 2121450 - 2122622 | 44019.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10540 | Not Available | Positive | 2122802 - 2126188 | 124480.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

