Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein | SAMN04487898_10521 | Not Available | Positive | 2095817 - 2096218 | 14660.5 |
| hypothetical protein | SAMN04487898_10522 | Not Available | Positive | 2096220 - 2096573 | 13758.7 |
| polyhydroxybutyrate depolymerase | SAMN04487898_10523 | Not Available | Negative | 2096589 - 2097407 | 30086.7 |
| hypothetical protein | SAMN04487898_10524 | Not Available | Positive | 2097509 - 2098765 | 47984.0 |
| protein of unknown function | SAMN04487898_10525 | Not Available | Negative | 2098861 - 2099709 | 31262.5 |
| aminopeptidase n | SAMN04487898_10526 | Not Available | Positive | 2099855 - 2102422 | 98134.8 |
| hypothetical protein | SAMN04487898_10527 | Not Available | Negative | 2102424 - 2103227 | 30803.6 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN04487898_10528 | Not Available | Positive | 2103426 - 2104760 | 49064.6 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN04487898_10529 | Not Available | Positive | 2104757 - 2105776 | 37495.0 |
| hypothetical protein | SAMN04487898_10530 | Not Available | Positive | 2105971 - 2106864 | 31010.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

