Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muts domain iii | SAMN04487898_101130 | Not Available | Positive | 182360 - 185011 | 98866.6 |
| zinc protease | SAMN04487898_101131 | Not Available | Positive | 185001 - 187784 | 104147.0 |
| abc-2 type transport system permease protein | SAMN04487898_101132 | Not Available | Positive | 187795 - 190086 | 85541.9 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04487898_101133 | Not Available | Positive | 190088 - 190855 | 29994.9 |
| lysophospholipase l1 | SAMN04487898_101134 | Not Available | Negative | 190991 - 191812 | 31265.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_101135 | Not Available | Positive | 191958 - 192503 | 20876.4 |
| acetyl esterase/lipase | SAMN04487898_101136 | Not Available | Positive | 192593 - 193447 | 31253.0 |
| fecr family protein | SAMN04487898_101137 | Not Available | Positive | 193539 - 194690 | 42706.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101138 | Not Available | Positive | 194912 - 198265 | 124366.0 |
| starch-binding associating with outer membrane | SAMN04487898_101139 | Not Available | Positive | 198313 - 199908 | 60031.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

