Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_104354 | Not Available | Positive | 2015365 - 2015928 | 21253.0 |
| hypothetical protein | SAMN04487898_104355 | Not Available | Positive | 2015967 - 2016365 | 15226.5 |
| hypothetical protein | SAMN04487898_104356 | Not Available | Positive | 2016376 - 2016909 | 20321.1 |
| response regulator receiver domain-containing protein | SAMN04487898_104357 | Not Available | Positive | 2017064 - 2017420 | 13108.5 |
| two component transcriptional regulator, luxr family | SAMN04487898_104358 | Not Available | Negative | 2017448 - 2018062 | 22754.1 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04487898_104359 | Not Available | Negative | 2018070 - 2020007 | 74075.6 |
| hypothetical protein | SAMN04487898_104360 | Not Available | Positive | 2020171 - 2020800 | 23723.1 |
| ipt/tig domain-containing protein | SAMN04487898_104361 | Not Available | Positive | 2020908 - 2022242 | 46586.7 |
| hypothetical protein | SAMN04487898_104362 | Not Available | Positive | 2022270 - 2023670 | 51339.9 |
| hypothetical protein | SAMN04487898_104363 | Not Available | Positive | 2023790 - 2024332 | 19509.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

