Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | SAMN04487898_104334 | Not Available | Negative | 1992364 - 1993002 | 24532.4 |
| lysm repeat-containing protein | SAMN04487898_104335 | Not Available | Negative | 1992992 - 1994176 | 43614.5 |
| starvation-inducible dna-binding protein | SAMN04487898_104336 | Not Available | Positive | 1994363 - 1994842 | 18473.2 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN04487898_104337 | Not Available | Positive | 1994925 - 1996757 | 67542.3 |
| hypothetical protein | SAMN04487898_104338 | Not Available | Negative | 1996796 - 1998466 | 62163.7 |
| long-chain fatty acid transport protein | SAMN04487898_104339 | Not Available | Negative | 1998555 - 2000087 | 55887.7 |
| hypothetical protein | SAMN04487898_104340 | Not Available | Negative | 2000106 - 2001032 | 33485.7 |
| prolyl-trna synthetase | SAMN04487898_104341 | Not Available | Positive | 2001136 - 2002608 | 55680.4 |
| hypothetical protein | SAMN04487898_104342 | Not Available | Positive | 2002618 - 2003313 | 26589.8 |
| cystathionine gamma-lyase | SAMN04487898_104343 | Not Available | Positive | 2003310 - 2004449 | 41885.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

