Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_104324 | Not Available | Negative | 1982136 - 1983242 | 41304.6 |
| aspartate kinase | SAMN04487898_104325 | Not Available | Negative | 1983327 - 1984601 | 48541.6 |
| protein of unknown function | SAMN04487898_104326 | Not Available | Negative | 1984605 - 1985408 | 30460.9 |
| l-amino acid n-acyltransferase ynca | SAMN04487898_104327 | Not Available | Negative | 1985429 - 1985896 | 17818.2 |
| hypothetical protein | SAMN04487898_104328 | Not Available | Negative | 1985980 - 1986678 | 26195.7 |
| protein of unknown function | SAMN04487898_104329 | Not Available | Positive | 1986749 - 1987327 | 22026.0 |
| dna mismatch repair protein muts2 | SAMN04487898_104330 | Not Available | Positive | 1987330 - 1989702 | 89491.8 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04487898_104331 | Not Available | Positive | 1989714 - 1990865 | 41999.1 |
| 3-oxoacid coa-transferase subunit a | SAMN04487898_104332 | Not Available | Positive | 1990921 - 1991622 | 25378.6 |
| 3-oxoacid coa-transferase subunit b | SAMN04487898_104333 | Not Available | Positive | 1991640 - 1992296 | 23304.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

