Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMN04487898_104284 | Not Available | Positive | 1941175 - 1942416 | 44634.6 |
| l-lactate dehydrogenase complex protein lldg | SAMN04487898_104285 | Not Available | Negative | 1942419 - 1943000 | 20991.1 |
| l-lactate dehydrogenase complex protein lldf | SAMN04487898_104286 | Not Available | Negative | 1942993 - 1944372 | 51961.3 |
| l-lactate dehydrogenase complex protein llde | SAMN04487898_104287 | Not Available | Negative | 1944404 - 1945138 | 26865.6 |
| transcriptional regulator, laci family | SAMN04487898_104288 | Not Available | Positive | 1945192 - 1946328 | 42147.9 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN04487898_104289 | Not Available | Positive | 1946383 - 1947225 | 31327.2 |
| protein of unknown function | SAMN04487898_104290 | Not Available | Positive | 1947244 - 1948371 | 41503.6 |
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN04487898_104291 | Not Available | Positive | 1948390 - 1949160 | 27433.8 |
| lysophospholipase l1 | SAMN04487898_104292 | Not Available | Positive | 1949252 - 1950349 | 40799.0 |
| arac-type dna-binding protein | SAMN04487898_104293 | Not Available | Negative | 1950353 - 1951222 | 33534.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

