Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, acs family, hexuronate transporter | SAMN04487898_104274 | Not Available | Negative | 1929634 - 1930917 | 47341.6 |
| acetyl esterase/lipase | SAMN04487898_104275 | Not Available | Negative | 1930931 - 1931812 | 31662.4 |
| cupin domain protein | SAMN04487898_104276 | Not Available | Negative | 1931838 - 1932173 | 12682.2 |
| alginate lyase | SAMN04487898_104277 | Not Available | Negative | 1932180 - 1934321 | 80108.7 |
| gntr family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex | SAMN04487898_104278 | Not Available | Negative | 1934347 - 1935108 | 28466.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | SAMN04487898_104279 | Not Available | Negative | 1935155 - 1936138 | 35848.9 |
| acetolactate decarboxylase | SAMN04487898_104280 | Not Available | Positive | 1936362 - 1937162 | 29834.7 |
| helix-turn-helix | SAMN04487898_104281 | Not Available | Positive | 1937283 - 1937822 | 20340.9 |
| amidohydrolase family protein | SAMN04487898_104282 | Not Available | Positive | 1937898 - 1939280 | 51894.0 |
| hypothetical protein | SAMN04487898_104283 | Not Available | Negative | 1939440 - 1940969 | 55067.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

