Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+-dicarboxylate symporter | SAMN04487898_104264 | Not Available | Negative | 1912968 - 1914188 | 43008.4 |
| hypothetical protein | SAMN04487898_104265 | Not Available | Positive | 1914364 - 1914687 | 12665.3 |
| alginate lyase | SAMN04487898_104266 | Not Available | Negative | 1914691 - 1915461 | 28627.2 |
| poly(beta-d-mannuronate) lyase | SAMN04487898_104267 | Not Available | Negative | 1915468 - 1917789 | 85585.4 |
| hypothetical protein | SAMN04487898_104268 | Not Available | Negative | 1917801 - 1919384 | 57604.6 |
| starch-binding associating with outer membrane | SAMN04487898_104269 | Not Available | Negative | 1919409 - 1920986 | 57892.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_104270 | Not Available | Negative | 1921014 - 1924217 | 117689.0 |
| starch-binding associating with outer membrane | SAMN04487898_104271 | Not Available | Negative | 1924260 - 1925654 | 52336.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_104272 | Not Available | Negative | 1925665 - 1928712 | 110358.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04487898_104273 | Not Available | Negative | 1928868 - 1929620 | 26344.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

