Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superfamily ii dna or rna helicase | SAMN04487898_104244 | Not Available | Positive | 1879737 - 1882637 | 110576.0 |
| outer membrane protein | SAMN04487898_104245 | Not Available | Positive | 1883056 - 1884351 | 47959.0 |
| hlyd family secretion protein | SAMN04487898_104246 | Not Available | Positive | 1884388 - 1885566 | 42060.5 |
| putative abc transport system atp-binding protein | SAMN04487898_104247 | Not Available | Positive | 1885566 - 1886318 | 27744.4 |
| putative abc transport system permease protein | SAMN04487898_104248 | Not Available | Positive | 1886315 - 1887535 | 43732.6 |
| two component transcriptional regulator, lyttr family | SAMN04487898_104249 | Not Available | Negative | 1887550 - 1888278 | 27602.6 |
| histidine kinase | SAMN04487898_104250 | Not Available | Negative | 1888275 - 1889345 | 40594.6 |
| sugar phosphate isomerase/epimerase | SAMN04487898_104251 | Not Available | Negative | 1889820 - 1890704 | 33096.7 |
| h+/cl-antiporter clca | SAMN04487898_104252 | Not Available | Negative | 1890801 - 1892453 | 58538.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_104253 | Not Available | Positive | 1892745 - 1893383 | 24055.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

