Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna1val (adenine37-n6)-methyltransferase | SAMN04487898_104234 | Not Available | Positive | 1874062 - 1874766 | 26159.3 |
| hypothetical protein | SAMN04487898_104235 | Not Available | Positive | 1874773 - 1875264 | 18601.5 |
| fructose-1,6-bisphosphatase i | SAMN04487898_104236 | Not Available | Positive | 1875286 - 1876371 | 39017.5 |
| ribonuclease hi | SAMN04487898_104237 | Not Available | Negative | 1876471 - 1876944 | 17691.2 |
| Trna-his | Not Available | Not Available | Positive | 1877125 - 1877200 | Not Available |
| transposase | SAMN04487898_104239 | Not Available | Negative | 1877340 - 1878323 | 38022.0 |
| hypothetical protein | SAMN04487898_104240 | Not Available | Negative | 1878316 - 1878669 | 13429.5 |
| protein of unknown function | SAMN04487898_104241 | Not Available | Negative | 1878826 - 1879302 | 17497.5 |
| uncharacterised protein family (upf0175) | SAMN04487898_104242 | Not Available | Negative | 1879286 - 1879522 | 9041.76 |
| hypothetical protein | SAMN04487898_104243 | Not Available | Positive | 1879559 - 1879681 | 4692.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

