Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s46 | SAMN04487898_104224 | Not Available | Positive | 1858008 - 1860170 | 80948.1 |
| lactoylglutathione lyase | SAMN04487898_104225 | Not Available | Positive | 1860353 - 1860820 | 17459.8 |
| lysophospholipase l1 | SAMN04487898_104226 | Not Available | Positive | 1860911 - 1861852 | 35077.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN04487898_104227 | Not Available | Negative | 1861877 - 1863094 | 44213.6 |
| glutamine synthetase | SAMN04487898_104228 | Not Available | Negative | 1863146 - 1865332 | 81469.6 |
| hypothetical protein | SAMN04487898_104229 | Not Available | Negative | 1865533 - 1866447 | 35498.5 |
| predicted membrane protein | SAMN04487898_104230 | Not Available | Negative | 1866428 - 1868899 | 92443.4 |
| putative auto-transporter adhesin, head gin domain | SAMN04487898_104231 | Not Available | Negative | 1868956 - 1869693 | 25427.6 |
| hypothetical protein | SAMN04487898_104232 | Not Available | Negative | 1869811 - 1870053 | 9189.88 |
| phosphoribosylformylglycinamidine synthase | SAMN04487898_104233 | Not Available | Negative | 1870229 - 1873897 | 133986.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

