Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_104214 | Not Available | Positive | 1844432 - 1845346 | 33499.7 |
| predicted acyltransferase | SAMN04487898_104215 | Not Available | Positive | 1845380 - 1846774 | 51783.0 |
| mfs transporter, pat family, beta-lactamase induction signal transducer ampg | SAMN04487898_104216 | Not Available | Positive | 1846808 - 1848118 | 48441.2 |
| lysophospholipase l1 | SAMN04487898_104217 | Not Available | Positive | 1848143 - 1848817 | 25282.2 |
| lysophospholipase l1 | SAMN04487898_104218 | Not Available | Positive | 1848819 - 1849511 | 26371.4 |
| protein of unknown function | SAMN04487898_104219 | Not Available | Positive | 1849508 - 1850443 | 35967.5 |
| n-acylglucosamine 2-epimerase | SAMN04487898_104220 | Not Available | Positive | 1850452 - 1851666 | 47314.0 |
| hypothetical protein | SAMN04487898_104221 | Not Available | Positive | 1851783 - 1852703 | 34833.8 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04487898_104222 | Not Available | Negative | 1852698 - 1856489 | 145715.0 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04487898_104223 | Not Available | Negative | 1856486 - 1857784 | 49752.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

