Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m28 | SAMN04487898_104194 | Not Available | Negative | 1815952 - 1816914 | 35995.9 |
| voltage-dependent potassium channel beta subunit, animal | SAMN04487898_104195 | Not Available | Positive | 1817039 - 1818022 | 36891.4 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN04487898_104196 | Not Available | Negative | 1818085 - 1819533 | 53522.3 |
| rna polymerase primary sigma factor | SAMN04487898_104197 | Not Available | Negative | 1819630 - 1820490 | 32664.1 |
| hypothetical protein | SAMN04487898_104198 | Not Available | Negative | 1820835 - 1821164 | 12023.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04487898_104199 | Not Available | Negative | 1821247 - 1822086 | 32045.3 |
| dihydrolipoamide dehydrogenase | SAMN04487898_104200 | Not Available | Negative | 1822444 - 1823832 | 48813.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN04487898_104201 | Not Available | Positive | 1824159 - 1826744 | 94148.4 |
| hypothetical protein | SAMN04487898_104202 | Not Available | Positive | 1826755 - 1827912 | 41645.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_104203 | Not Available | Negative | 1827980 - 1828540 | 21943.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

