Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | SAMN04487898_104174 | Not Available | Positive | 1792957 - 1793946 | 36002.1 |
| phosphoribosylanthranilate isomerase | SAMN04487898_104175 | Not Available | Positive | 1793985 - 1794623 | 23731.6 |
| tryptophan synthase beta chain | SAMN04487898_104176 | Not Available | Positive | 1794620 - 1795801 | 43098.7 |
| tryptophan synthase, alpha chain | SAMN04487898_104177 | Not Available | Positive | 1795819 - 1796586 | 28139.8 |
| na+:h+ antiporter, nhaa family | SAMN04487898_104178 | Not Available | Negative | 1796576 - 1797760 | 42546.4 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN04487898_104179 | Not Available | Negative | 1797790 - 1798410 | 22906.6 |
| glutamate synthase domain-containing protein 2 | SAMN04487898_104180 | Not Available | Positive | 1798489 - 1800156 | 60515.1 |
| asparaginyl-trna synthetase | SAMN04487898_104181 | Not Available | Negative | 1800232 - 1801680 | 55341.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN04487898_104182 | Not Available | Negative | 1802124 - 1804607 | 92985.8 |
| succinyl-coa synthetase beta subunit | SAMN04487898_104183 | Not Available | Negative | 1804809 - 1806002 | 42780.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

