Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfuration protein sufe | SAMN04487898_104164 | Not Available | Positive | 1783681 - 1784127 | 16864.6 |
| fes assembly suf system protein | SAMN04487898_104165 | Not Available | Positive | 1784131 - 1784445 | 11863.5 |
| transcriptional regulator, badm/rrf2 family | SAMN04487898_104166 | Not Available | Positive | 1784464 - 1784928 | 16992.7 |
| alanine racemase | SAMN04487898_104167 | Not Available | Positive | 1785231 - 1787684 | 90678.7 |
| uncharacterized membrane protein | SAMN04487898_104168 | Not Available | Positive | 1787728 - 1788321 | 21813.1 |
| arsenate reductase | SAMN04487898_104169 | Not Available | Positive | 1788485 - 1788829 | 12948.7 |
| hypothetical protein | SAMN04487898_104170 | Not Available | Negative | 1788998 - 1789705 | 26823.4 |
| na+/proline symporter | SAMN04487898_104171 | Not Available | Negative | 1789720 - 1791228 | 56050.4 |
| dna replication and repair protein recr | SAMN04487898_104172 | Not Available | Positive | 1791298 - 1791915 | 22768.6 |
| short-chain dehydrogenase | SAMN04487898_104173 | Not Available | Positive | 1791921 - 1792736 | 29346.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

