Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate synthase | SAMN04487898_101110 | Not Available | Positive | 157458 - 159833 | 87664.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_101111 | Not Available | Negative | 159840 - 160895 | 39647.3 |
| ca2+-transporting atpase | SAMN04487898_101112 | Not Available | Positive | 160992 - 163487 | 91374.3 |
| 6-phosphofructokinase 2 | SAMN04487898_101113 | Not Available | Negative | 163459 - 164403 | 33873.4 |
| metallo-beta-lactamase family protein | SAMN04487898_101114 | Not Available | Positive | 164507 - 165994 | 56132.3 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | SAMN04487898_101115 | Not Available | Negative | 165983 - 166603 | 23389.8 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_101116 | Not Available | Negative | 166608 - 167486 | 32607.9 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04487898_101117 | Not Available | Negative | 167659 - 168669 | 37253.8 |
| phosphopantetheine attachment site | SAMN04487898_101118 | Not Available | Negative | 168696 - 168926 | 8774.34 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | SAMN04487898_101119 | Not Available | Negative | 168955 - 169605 | 22999.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

