Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 1773196 - 1773283 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1773322 - 1773397 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1773459 - 1773546 | Not Available |
| predicted protein | SAMN04487898_104157 | Not Available | Positive | 1773682 - 1774614 | 34137.1 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_104158 | Not Available | Positive | 1774861 - 1777881 | 108749.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_104159 | Not Available | Positive | 1777906 - 1778811 | 33161.5 |
| fe-s cluster assembly protein sufb | SAMN04487898_104160 | Not Available | Positive | 1778920 - 1780365 | 53891.3 |
| fe-s cluster assembly atp-binding protein | SAMN04487898_104161 | Not Available | Positive | 1780384 - 1781142 | 28013.8 |
| fe-s cluster assembly protein sufd | SAMN04487898_104162 | Not Available | Positive | 1781167 - 1782465 | 48287.2 |
| cysteine desulfurase / selenocysteine lyase | SAMN04487898_104163 | Not Available | Positive | 1782467 - 1783681 | 44364.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

