Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_104144 | Not Available | Positive | 1764934 - 1765497 | 19833.6 |
| hypothetical protein | SAMN04487898_104145 | Not Available | Positive | 1765560 - 1765994 | 16359.1 |
| uncharacterized protein | SAMN04487898_104146 | Not Available | Positive | 1765995 - 1767011 | 36770.8 |
| hypothetical protein | SAMN04487898_104147 | Not Available | Negative | 1767317 - 1767706 | 14243.0 |
| glyoxylase i family protein | SAMN04487898_104148 | Not Available | Positive | 1767823 - 1768206 | 14749.8 |
| Trna-cys | Not Available | Not Available | Positive | 1768291 - 1768364 | Not Available |
| hypothetical protein | SAMN04487898_104150 | Not Available | Positive | 1768667 - 1769185 | 19898.6 |
| asma protein | SAMN04487898_104151 | Not Available | Positive | 1769322 - 1772408 | 113851.0 |
| regulatory protein | SAMN04487898_104152 | Not Available | Positive | 1772433 - 1772924 | 19233.5 |
| Trna-gly | Not Available | Not Available | Positive | 1773054 - 1773129 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

