Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein (putative transposase or invertase) | SAMN04487898_104134 | Not Available | Negative | 1753250 - 1754149 | 35123.9 |
| cu2+-exporting atpase | SAMN04487898_104135 | Not Available | Positive | 1754418 - 1756646 | 79774.7 |
| copper chaperone copz | SAMN04487898_104136 | Not Available | Positive | 1756696 - 1756908 | 7758.21 |
| hypothetical protein | SAMN04487898_104137 | Not Available | Positive | 1757065 - 1757463 | 14979.3 |
| copper chaperone copz | SAMN04487898_104138 | Not Available | Positive | 1757595 - 1757945 | 12496.1 |
| heavy metal efflux pump, czca family | SAMN04487898_104139 | Not Available | Positive | 1758004 - 1759275 | 47298.4 |
| cu(i)/ag(i) efflux system membrane protein cusa/sila | SAMN04487898_104140 | Not Available | Positive | 1759272 - 1761209 | 71487.3 |
| outer membrane protein tolc | SAMN04487898_104141 | Not Available | Positive | 1761175 - 1762449 | 48831.9 |
| hlyd family secretion protein | SAMN04487898_104142 | Not Available | Positive | 1762427 - 1763665 | 44744.4 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN04487898_104143 | Not Available | Positive | 1763683 - 1764900 | 44823.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

