Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted amidohydrolase | SAMN04487898_104124 | Not Available | Negative | 1739146 - 1740090 | 35489.8 |
| arac-type dna-binding protein | SAMN04487898_104125 | Not Available | Negative | 1740164 - 1740952 | 29242.4 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN04487898_104126 | Not Available | Negative | 1741050 - 1741646 | 22612.5 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_104127 | Not Available | Negative | 1741711 - 1742277 | 21883.7 |
| tigr00297 family protein | SAMN04487898_104128 | Not Available | Negative | 1742343 - 1743044 | 24712.0 |
| hypothetical protein | SAMN04487898_104129 | Not Available | Positive | 1743647 - 1748182 | 150659.0 |
| chaperone of endosialidase | SAMN04487898_104130 | Not Available | Positive | 1748208 - 1751276 | 107714.0 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_104131 | Not Available | Positive | 1751310 - 1752086 | 28884.6 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_104132 | Not Available | Positive | 1752091 - 1753008 | 34031.0 |
| hypothetical protein | SAMN04487898_104133 | Not Available | Positive | 1753013 - 1753219 | 7936.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

