Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_104114 | Not Available | Positive | 1733049 - 1733648 | 23157.9 |
| hypothetical protein | SAMN04487898_104115 | Not Available | Positive | 1733741 - 1733869 | 4730.94 |
| hypothetical protein | SAMN04487898_104116 | Not Available | Positive | 1733929 - 1734315 | 13180.8 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04487898_104117 | Not Available | Negative | 1734451 - 1735428 | 37167.1 |
| doxx-like family protein | SAMN04487898_104118 | Not Available | Positive | 1735568 - 1736002 | 15972.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04487898_104119 | Not Available | Positive | 1736049 - 1736498 | 16953.6 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN04487898_104120 | Not Available | Positive | 1736491 - 1736871 | 14457.4 |
| hypothetical protein | SAMN04487898_104121 | Not Available | Negative | 1737056 - 1737472 | 15414.0 |
| hypothetical protein | SAMN04487898_104122 | Not Available | Negative | 1737529 - 1738020 | 19324.7 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04487898_104123 | Not Available | Positive | 1738164 - 1739141 | 36857.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

