Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,4-dienoyl-coa reductase | SAMN04487898_104104 | Not Available | Positive | 1726465 - 1727523 | 39036.8 |
| hypothetical protein | SAMN04487898_104105 | Not Available | Positive | 1727546 - 1728097 | 21426.4 |
| oxalate decarboxylase | SAMN04487898_104106 | Not Available | Positive | 1728321 - 1728488 | 5942.09 |
| protein of unknown function | SAMN04487898_104107 | Not Available | Positive | 1728703 - 1728945 | 8384.5 |
| peroxiredoxin | SAMN04487898_104108 | Not Available | Positive | 1728955 - 1729419 | 17528.9 |
| thioredoxin | SAMN04487898_104109 | Not Available | Positive | 1729422 - 1729937 | 19165.4 |
| non-heme chloroperoxidase | SAMN04487898_104110 | Not Available | Positive | 1730102 - 1730923 | 30594.3 |
| hypothetical protein | SAMN04487898_104111 | Not Available | Negative | 1731294 - 1731617 | 11740.9 |
| transcriptional regulator, hxlr family | SAMN04487898_104112 | Not Available | Positive | 1731756 - 1732121 | 14139.4 |
| hypothetical protein | SAMN04487898_104113 | Not Available | Negative | 1732219 - 1732842 | 24008.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

