Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lgfp repeat-containing protein | SAMN04487898_10494 | Not Available | Positive | 1716243 - 1717376 | 42705.1 |
| hypothetical protein | SAMN04487898_10495 | Not Available | Positive | 1717385 - 1718011 | 23465.6 |
| hypothetical protein | SAMN04487898_10496 | Not Available | Positive | 1718019 - 1718909 | 33867.3 |
| hypothetical protein | SAMN04487898_10497 | Not Available | Positive | 1719071 - 1719550 | 17375.2 |
| nadph:quinone reductase | SAMN04487898_10498 | Not Available | Negative | 1719891 - 1720883 | 35883.0 |
| hypothetical protein | SAMN04487898_10499 | Not Available | Positive | 1721117 - 1721488 | 14261.4 |
| arac-type dna-binding protein | SAMN04487898_104100 | Not Available | Negative | 1721524 - 1722324 | 30841.7 |
| starvation-inducible dna-binding protein | SAMN04487898_104101 | Not Available | Positive | 1722921 - 1723394 | 18351.7 |
| two component transcriptional regulator, lyttr family | SAMN04487898_104102 | Not Available | Positive | 1723465 - 1724160 | 26513.2 |
| signal transduction histidine kinase | SAMN04487898_104103 | Not Available | Positive | 1724245 - 1726452 | 82724.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

