Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone lola | SAMN04487898_10484 | Not Available | Positive | 1706435 - 1707085 | 24371.4 |
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN04487898_10485 | Not Available | Positive | 1707125 - 1707889 | 28563.3 |
| Trna-leu | Not Available | Not Available | Positive | 1707911 - 1707994 | Not Available |
| hypothetical protein | SAMN04487898_10487 | Not Available | Negative | 1708227 - 1708775 | 21418.4 |
| tetratricopeptide repeat-containing protein | SAMN04487898_10488 | Not Available | Positive | 1709058 - 1711304 | 86313.8 |
| two component transcriptional regulator, lyttr family | SAMN04487898_10489 | Not Available | Positive | 1711306 - 1712046 | 28416.6 |
| hypothetical protein | SAMN04487898_10490 | Not Available | Positive | 1712246 - 1713280 | 37549.5 |
| hypothetical protein | SAMN04487898_10491 | Not Available | Positive | 1713289 - 1713930 | 24178.9 |
| yd repeat-containing protein | SAMN04487898_10492 | Not Available | Positive | 1713940 - 1715058 | 40181.6 |
| lgfp repeat-containing protein | SAMN04487898_10493 | Not Available | Positive | 1715067 - 1716218 | 43609.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

