Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN04487898_10474 | Not Available | Positive | 1695932 - 1696426 | 18668.8 |
| hpt (histidine-containing phosphotransfer) domain-containing protein | SAMN04487898_10475 | Not Available | Positive | 1696443 - 1696823 | 14581.5 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN04487898_10476 | Not Available | Negative | 1696836 - 1697522 | 25381.7 |
| transcription termination factor rho | SAMN04487898_10477 | Not Available | Negative | 1697525 - 1699417 | 69415.0 |
| orotidine-5'-phosphate decarboxylase | SAMN04487898_10478 | Not Available | Positive | 1699769 - 1700599 | 30782.8 |
| threonine/homoserine efflux transporter rhta | SAMN04487898_10479 | Not Available | Positive | 1700596 - 1701498 | 33192.8 |
| protein of unknown function | SAMN04487898_10480 | Not Available | Positive | 1701539 - 1702819 | 49250.7 |
| phage shock protein c (pspc) family protein | SAMN04487898_10481 | Not Available | Positive | 1702821 - 1703042 | 8734.07 |
| ankyrin repeat | SAMN04487898_10482 | Not Available | Negative | 1703043 - 1703687 | 22838.5 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN04487898_10483 | Not Available | Positive | 1703847 - 1706417 | 96299.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

