Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_10464 | Not Available | Negative | 1684446 - 1685276 | 31252.6 |
| trigger factor | SAMN04487898_10465 | Not Available | Positive | 1685757 - 1687103 | 51267.0 |
| atp-dependent clp protease, protease subunit | SAMN04487898_10466 | Not Available | Positive | 1687319 - 1688011 | 25577.8 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04487898_10467 | Not Available | Positive | 1688015 - 1689256 | 45884.7 |
| amp nucleosidase | SAMN04487898_10468 | Not Available | Positive | 1689319 - 1690182 | 32121.0 |
| phosphohistidine phosphatase | SAMN04487898_10469 | Not Available | Negative | 1690179 - 1690682 | 18843.4 |
| adp-heptose:lps heptosyltransferase | SAMN04487898_10470 | Not Available | Negative | 1690675 - 1691715 | 38973.1 |
| protein of unknown function | SAMN04487898_10471 | Not Available | Negative | 1691712 - 1692320 | 23793.2 |
| dna polymerase (family 10) | SAMN04487898_10472 | Not Available | Negative | 1692339 - 1694015 | 62494.5 |
| protease-4 | SAMN04487898_10473 | Not Available | Negative | 1694087 - 1695859 | 65243.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

