Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_101101 | Not Available | Positive | 148497 - 149378 | 32985.3 |
| outer membrane protein tolc | SAMN04487898_101102 | Not Available | Positive | 149480 - 150772 | 48335.5 |
| hlyd family secretion protein | SAMN04487898_101103 | Not Available | Positive | 150795 - 151742 | 34807.5 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 150856 - 150967 | 18.01 |
| abc-type multidrug transport system, atpase component | SAMN04487898_101104 | Not Available | Positive | 151739 - 152659 | 34350.8 |
| abc-2 type transport system atp-binding protein | SAMN04487898_101105 | Not Available | Positive | 152661 - 153407 | 27527.2 |
| abc-2 type transport system permease protein | SAMN04487898_101106 | Not Available | Positive | 153409 - 154512 | 41579.2 |
| abc-2 type transport system permease protein | SAMN04487898_101107 | Not Available | Positive | 154509 - 155630 | 42690.0 |
| hypothetical protein | SAMN04487898_101108 | Not Available | Positive | 155769 - 156488 | 27934.9 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_101109 | Not Available | Positive | 156538 - 157419 | 32893.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

