Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04487898_10444 | Not Available | Positive | 1663517 - 1663945 | 16280.9 |
| iron complex outermembrane recepter protein | SAMN04487898_10445 | Not Available | Positive | 1664092 - 1666404 | 84664.4 |
| uncharacterized iron-regulated membrane protein | SAMN04487898_10446 | Not Available | Positive | 1666455 - 1667522 | 40098.3 |
| nudix-type nucleoside diphosphatase, yffh/adpp family | SAMN04487898_10447 | Not Available | Negative | 1667582 - 1668160 | 21896.1 |
| lysophospholipase l1 | SAMN04487898_10448 | Not Available | Positive | 1668318 - 1669016 | 26445.1 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN04487898_10449 | Not Available | Negative | 1669021 - 1669443 | 15831.5 |
| hypothetical protein | SAMN04487898_10450 | Not Available | Negative | 1669443 - 1670168 | 27437.9 |
| hypothetical protein | SAMN04487898_10451 | Not Available | Negative | 1670267 - 1671457 | 45448.3 |
| protein of unknown function | SAMN04487898_10452 | Not Available | Negative | 1671556 - 1672254 | 26898.4 |
| sulfite reductase (ferredoxin) | SAMN04487898_10453 | Not Available | Positive | 1672533 - 1674638 | 79053.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

