Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10414 | Not Available | Positive | 1626164 - 1626706 | 21400.6 |
| fecr family protein | SAMN04487898_10415 | Not Available | Positive | 1626750 - 1627874 | 42153.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_10416 | Not Available | Positive | 1627951 - 1631283 | 120904.0 |
| starch-binding associating with outer membrane | SAMN04487898_10417 | Not Available | Positive | 1631295 - 1632977 | 62970.7 |
| fad dependent oxidoreductase | SAMN04487898_10418 | Not Available | Positive | 1632980 - 1634983 | 73906.8 |
| heparan-sulfate lyase | SAMN04487898_10419 | Not Available | Negative | 1635049 - 1637025 | 75857.6 |
| glycosyl hydrolase family 88 | SAMN04487898_10420 | Not Available | Negative | 1637029 - 1638240 | 45729.3 |
| hypothetical protein | SAMN04487898_10421 | Not Available | Positive | 1638522 - 1638857 | 12670.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_10422 | Not Available | Positive | 1638993 - 1639589 | 23213.7 |
| fecr family protein | SAMN04487898_10423 | Not Available | Positive | 1639647 - 1640573 | 34780.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

