Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, member 3 | SAMN04487898_1044 | Not Available | Positive | 1614635 - 1616269 | 61925.6 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN04487898_1045 | Not Available | Positive | 1616278 - 1616670 | 14781.7 |
| methionyl aminopeptidase | SAMN04487898_1046 | Not Available | Negative | 1616706 - 1617464 | 27607.9 |
| arac-type dna-binding protein | SAMN04487898_1047 | Not Available | Positive | 1617578 - 1618405 | 31689.6 |
| hypothetical protein | SAMN04487898_1048 | Not Available | Negative | 1618433 - 1619218 | 30243.9 |
| protein of unknown function | SAMN04487898_1049 | Not Available | Positive | 1619455 - 1620024 | 21180.0 |
| peptide-methionine (s)-s-oxide reductase | SAMN04487898_10410 | Not Available | Positive | 1620091 - 1620582 | 18471.6 |
| iron complex outermembrane recepter protein | SAMN04487898_10411 | Not Available | Negative | 1620638 - 1622503 | 69978.8 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04487898_10412 | Not Available | Positive | 1622568 - 1624085 | 57452.6 |
| kup system potassium uptake protein | SAMN04487898_10413 | Not Available | Negative | 1624078 - 1626015 | 72517.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

