Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_103421 | Not Available | Negative | 1604683 - 1605498 | 30865.5 |
| hypothetical protein | SAMN04487898_103422 | Not Available | Negative | 1605489 - 1605866 | 14665.8 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04487898_103423 | Not Available | Negative | 1605928 - 1607013 | 40901.3 |
| dna topoisomerase-3 | SAMN04487898_103424 | Not Available | Negative | 1607051 - 1608916 | 69406.5 |
| acetoin utilization deacetylase acuc | SAMN04487898_103425 | Not Available | Negative | 1608919 - 1609818 | 33410.0 |
| putative membrane protein | SAMN04487898_103426 | Not Available | Negative | 1609820 - 1610680 | 32884.1 |
| kynureninase | SAMN04487898_103427 | Not Available | Negative | 1610725 - 1612014 | 48177.6 |
| transposase domain | SAMN04487898_103428 | Not Available | Positive | 1612200 - 1612467 | 10110.3 |
| hypothetical protein | SAMN04487898_1041 | Not Available | Positive | 1612468 - 1612716 | 9851.23 |
| subtilase family protein | SAMN04487898_1043 | Not Available | Positive | 1612849 - 1614570 | 63113.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

