Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter | SAMN04487898_103411 | Not Available | Negative | 1595285 - 1596469 | 42974.4 |
| tpr repeat-containing protein | SAMN04487898_103412 | Not Available | Negative | 1596497 - 1596832 | 12699.8 |
| electron transfer flavoprotein beta subunit | SAMN04487898_103413 | Not Available | Positive | 1596860 - 1597660 | 29014.8 |
| electron transfer flavoprotein alpha subunit apoprotein | SAMN04487898_103414 | Not Available | Positive | 1597704 - 1598675 | 33933.7 |
| hypothetical protein | SAMN04487898_103415 | Not Available | Positive | 1598747 - 1599361 | 22945.4 |
| mfs transporter, nhs family, xanthosine permease | SAMN04487898_103416 | Not Available | Positive | 1599351 - 1600736 | 51834.9 |
| citrate synthase | SAMN04487898_103417 | Not Available | Negative | 1600835 - 1602121 | 48336.2 |
| protein of unknown function | SAMN04487898_103418 | Not Available | Negative | 1602245 - 1602778 | 19189.9 |
| hypothetical protein | SAMN04487898_103419 | Not Available | Negative | 1602875 - 1603384 | 17408.6 |
| trna dimethylallyltransferase | SAMN04487898_103420 | Not Available | Negative | 1603755 - 1604690 | 35244.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

