Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN04487898_103391 | Not Available | Positive | 1575507 - 1575869 | 13584.5 |
| putative toxin-antitoxin system antitoxin component, tigr02293 family | SAMN04487898_103392 | Not Available | Positive | 1575934 - 1576392 | 16670.9 |
| res domain-containing protein | SAMN04487898_103393 | Not Available | Positive | 1576395 - 1576847 | 17172.0 |
| hypothetical protein | SAMN04487898_103394 | Not Available | Positive | 1576896 - 1577042 | 5677.9 |
| regulator of nucleoside diphosphate kinase | SAMN04487898_103395 | Not Available | Positive | 1577212 - 1577589 | 14073.1 |
| hypothetical protein | SAMN04487898_103396 | Not Available | Negative | 1577628 - 1578398 | 28478.6 |
| methionine aminotransferase | SAMN04487898_103397 | Not Available | Positive | 1578468 - 1579613 | 43309.5 |
| carbon-nitrogen hydrolase | SAMN04487898_103398 | Not Available | Positive | 1579638 - 1580441 | 30998.1 |
| gtp-binding protein lepa | SAMN04487898_103399 | Not Available | Positive | 1580472 - 1582259 | 66558.9 |
| 5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | SAMN04487898_103400 | Not Available | Positive | 1582315 - 1583196 | 31785.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

