Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular exopolysaccharide family | SAMN04487898_103361 | Not Available | Positive | 1541753 - 1544062 | 87322.7 |
| transcription antitermination factor nusg | SAMN04487898_103362 | Not Available | Positive | 1544180 - 1544713 | 20766.2 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04487898_103363 | Not Available | Positive | 1544760 - 1545932 | 44040.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_103364 | Not Available | Positive | 1545953 - 1547062 | 41972.2 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04487898_103365 | Not Available | Positive | 1547124 - 1548371 | 46529.2 |
| hypothetical protein | SAMN04487898_103366 | Not Available | Negative | 1548468 - 1548824 | 13919.4 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04487898_103367 | Not Available | Negative | 1548889 - 1550835 | 73748.7 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487898_103368 | Not Available | Negative | 1550848 - 1551912 | 41590.7 |
| protein n-acetyltransferase, rimj/riml family | SAMN04487898_103369 | Not Available | Negative | 1551957 - 1552451 | 19027.7 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04487898_103370 | Not Available | Negative | 1552491 - 1553294 | 30995.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

