Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_103341 | Not Available | Negative | 1523409 - 1523567 | 5568.93 |
| hypothetical protein | SAMN04487898_103342 | Not Available | Negative | 1523581 - 1524147 | 21504.6 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN04487898_103343 | Not Available | Negative | 1524219 - 1524560 | 12959.8 |
| hypothetical protein | SAMN04487898_103344 | Not Available | Positive | 1524678 - 1525295 | 24118.3 |
| hypothetical protein | SAMN04487898_103345 | Not Available | Positive | 1525496 - 1525771 | 10485.2 |
| radical sam superfamily enzyme ygiq, upf0313 family | SAMN04487898_103346 | Not Available | Negative | 1525796 - 1528027 | 84961.0 |
| hypothetical protein | SAMN04487898_103347 | Not Available | Negative | 1528284 - 1528598 | 11690.0 |
| hypothetical protein | SAMN04487898_103348 | Not Available | Negative | 1528752 - 1529039 | 11117.5 |
| hypothetical protein | SAMN04487898_103349 | Not Available | Positive | 1529365 - 1529553 | 6749.34 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_103350 | Not Available | Positive | 1529619 - 1530179 | 21363.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

