Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_103331 | Not Available | Negative | 1512829 - 1515681 | 110352.0 |
| protein of unknown function duf262 | SAMN04487898_103332 | Not Available | Negative | 1515852 - 1517777 | 75468.7 |
| hypothetical protein | SAMN04487898_103333 | Not Available | Negative | 1517862 - 1518401 | 21183.8 |
| hypothetical protein | SAMN04487898_103334 | Not Available | Positive | 1518821 - 1519051 | 8487.41 |
| fic/doc family protein | SAMN04487898_103335 | Not Available | Negative | 1519148 - 1519420 | 10078.2 |
| hypothetical protein | SAMN04487898_103336 | Not Available | Negative | 1519500 - 1519676 | 6663.81 |
| pp_01198 | SAMN04487898_103337 | Not Available | Positive | 1519975 - 1521462 | Not Available |
| peptide chain release factor | SAMN04487898_103338 | Not Available | Positive | 1521465 - 1522082 | 22923.1 |
| methyltransferase domain-containing protein | SAMN04487898_103339 | Not Available | Negative | 1522205 - 1522813 | 22844.0 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN04487898_103340 | Not Available | Negative | 1522850 - 1523365 | 19985.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

