Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative auto-transporter adhesin, head gin domain | SAMN04487898_103311 | Not Available | Positive | 1489781 - 1490437 | 23515.3 |
| protein of unknown function | SAMN04487898_103312 | Not Available | Positive | 1490448 - 1491104 | 25511.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_103313 | Not Available | Positive | 1491115 - 1491702 | 23068.9 |
| fecr family protein | SAMN04487898_103314 | Not Available | Positive | 1491711 - 1492667 | 36076.1 |
| hypothetical protein | SAMN04487898_103315 | Not Available | Positive | 1492667 - 1494409 | 63477.2 |
| hypothetical protein | SAMN04487898_103316 | Not Available | Positive | 1494451 - 1494741 | 10627.7 |
| abc-2 type transport system permease protein | SAMN04487898_103317 | Not Available | Negative | 1494727 - 1495881 | 42966.3 |
| abc-2 type transport system permease protein | SAMN04487898_103318 | Not Available | Negative | 1495850 - 1497034 | 45017.6 |
| hlyd family secretion protein | SAMN04487898_103319 | Not Available | Negative | 1497034 - 1498053 | 37658.7 |
| outer membrane protein tolc | SAMN04487898_103320 | Not Available | Negative | 1498066 - 1499550 | 55114.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

