Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperone of endosialidase | SAMN04487898_10181 | Not Available | Positive | 132735 - 133655 | 32963.8 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN04487898_10182 | Not Available | Negative | 133685 - 134374 | 24102.5 |
| cytochrome b | SAMN04487898_10183 | Not Available | Negative | 134364 - 135047 | 25739.5 |
| protein of unknown function | SAMN04487898_10184 | Not Available | Negative | 135066 - 136286 | 45745.0 |
| protein of unknown function | SAMN04487898_10185 | Not Available | Negative | 136295 - 136525 | 8027.82 |
| thiamine biosynthesis lipoprotein | SAMN04487898_10186 | Not Available | Negative | 136527 - 137462 | 33904.6 |
| thioredoxin-related protein | SAMN04487898_10187 | Not Available | Negative | 137471 - 137893 | 16149.4 |
| cytochrome b6-f complex iron-sulfur subunit | SAMN04487898_10188 | Not Available | Negative | 137898 - 138323 | 14730.1 |
| hypothetical protein | SAMN04487898_10189 | Not Available | Negative | 138316 - 138552 | 8859.86 |
| hypothetical protein | SAMN04487898_10190 | Not Available | Negative | 138631 - 139425 | 28218.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

