Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN04487898_103281 | Not Available | Negative | 1457152 - 1458840 | 63095.2 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04487898_103282 | Not Available | Negative | 1458847 - 1459422 | 21747.3 |
| glycosyl transferase family 2 | SAMN04487898_103283 | Not Available | Positive | 1459590 - 1460417 | 31199.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_103284 | Not Available | Negative | 1460400 - 1461521 | 42098.7 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04487898_103285 | Not Available | Negative | 1461539 - 1462717 | 45094.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_103286 | Not Available | Negative | 1462751 - 1463968 | 46558.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_103287 | Not Available | Negative | 1464000 - 1464776 | 30616.5 |
| acetyltransferase (isoleucine patch superfamily) | SAMN04487898_103288 | Not Available | Negative | 1464807 - 1465427 | 22631.7 |
| o-antigen ligase like membrane protein | SAMN04487898_103289 | Not Available | Negative | 1465550 - 1466830 | 47531.3 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | SAMN04487898_103290 | Not Available | Negative | 1466859 - 1469024 | 81064.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

