Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_103271 | Not Available | Negative | 1445057 - 1446670 | 60572.0 |
| core-2/i-branching enzyme | SAMN04487898_103272 | Not Available | Negative | 1446728 - 1447585 | 33769.5 |
| hypothetical protein | SAMN04487898_103273 | Not Available | Positive | 1448025 - 1449347 | 48524.2 |
| lipopolysaccharide biosynthesis protein, lps:glycosyltransferase | SAMN04487898_103274 | Not Available | Negative | 1449467 - 1450351 | 33865.8 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04487898_103275 | Not Available | Negative | 1450373 - 1451737 | 51036.1 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04487898_103276 | Not Available | Negative | 1451902 - 1453488 | 62856.8 |
| phosphoglycolate phosphatase | SAMN04487898_103277 | Not Available | Positive | 1453552 - 1454241 | 26884.1 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04487898_103278 | Not Available | Positive | 1454252 - 1455235 | 38230.4 |
| choline dehydrogenase | SAMN04487898_103279 | Not Available | Positive | 1455248 - 1456687 | 54335.9 |
| hypothetical protein | SAMN04487898_103280 | Not Available | Positive | 1456692 - 1457120 | 16895.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

