Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wxcm-like, c-terminal | SAMN04487898_103261 | Not Available | Positive | 1433746 - 1434147 | 15456.2 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04487898_103262 | Not Available | Positive | 1434095 - 1435192 | 41566.9 |
| putative methyltransferase, lic12133 family | SAMN04487898_103263 | Not Available | Positive | 1435198 - 1436019 | 32569.9 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04487898_103264 | Not Available | Positive | 1436006 - 1437097 | 42094.8 |
| hydroxyneurosporene synthase (crtc) | SAMN04487898_103265 | Not Available | Positive | 1437114 - 1438178 | 40795.0 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN04487898_103266 | Not Available | Negative | 1438175 - 1439194 | 39407.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_103267 | Not Available | Negative | 1439181 - 1440374 | 43990.2 |
| atp-binding cassette, subfamily b | SAMN04487898_103268 | Not Available | Negative | 1440380 - 1442194 | 68215.4 |
| hypothetical protein | SAMN04487898_103269 | Not Available | Positive | 1442434 - 1443966 | 57048.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_103270 | Not Available | Positive | 1444043 - 1445017 | 37856.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

