Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_103251 | Not Available | Positive | 1415920 - 1416498 | 20933.6 |
| hypothetical protein | SAMN04487898_103252 | Not Available | Positive | 1416737 - 1416922 | 7199.58 |
| amino acid adenylation domain-containing protein | SAMN04487898_103253 | Not Available | Positive | 1417154 - 1423696 | 241912.0 |
| amino acid adenylation domain-containing protein | SAMN04487898_103254 | Not Available | Positive | 1423703 - 1428925 | 197870.0 |
| 4'-phosphopantetheinyl transferase | SAMN04487898_103255 | Not Available | Positive | 1428936 - 1429652 | 27404.7 |
| cupin-like domain-containing protein | SAMN04487898_103256 | Not Available | Positive | 1429662 - 1430516 | 32687.6 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04487898_103257 | Not Available | Negative | 1430518 - 1431684 | 44472.7 |
| hypothetical protein | SAMN04487898_103258 | Not Available | Negative | 1431688 - 1432626 | 36072.8 |
| hypothetical protein | SAMN04487898_103259 | Not Available | Negative | 1432721 - 1432900 | 6888.31 |
| core-2/i-branching enzyme | SAMN04487898_103260 | Not Available | Positive | 1432952 - 1433758 | 32111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

