Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_103241 | Not Available | Negative | 1406467 - 1407285 | 29844.1 |
| muts domain iii | SAMN04487898_103242 | Not Available | Positive | 1407403 - 1408737 | 50451.0 |
| hepn domain-containing protein | SAMN04487898_103243 | Not Available | Negative | 1408730 - 1409584 | 33357.9 |
| hypothetical protein | SAMN04487898_103244 | Not Available | Negative | 1409751 - 1410491 | 27868.3 |
| hypothetical protein | SAMN04487898_103245 | Not Available | Positive | 1410620 - 1411129 | 19335.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04487898_103246 | Not Available | Positive | 1411175 - 1411861 | 25856.9 |
| hypothetical protein | SAMN04487898_103247 | Not Available | Positive | 1411934 - 1412362 | 16288.5 |
| gaf domain-containing protein | SAMN04487898_103248 | Not Available | Negative | 1412398 - 1412877 | 17496.0 |
| peptidase s46 | SAMN04487898_103249 | Not Available | Positive | 1413088 - 1415268 | 81608.3 |
| hypothetical protein | SAMN04487898_103250 | Not Available | Positive | 1415339 - 1415590 | 9613.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

