Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 1381939 - 1382010 | Not Available |
| chromosomal replication initiator protein | SAMN04487898_103222 | Not Available | Negative | 1382145 - 1383578 | 54133.4 |
| trna pseudouridine65 synthase | SAMN04487898_103223 | Not Available | Negative | 1383775 - 1384452 | 25901.5 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN04487898_103224 | Not Available | Negative | 1384486 - 1385739 | 47778.4 |
| cysteine synthase b | SAMN04487898_103225 | Not Available | Negative | 1385767 - 1386639 | 31742.1 |
| serine o-acetyltransferase | SAMN04487898_103226 | Not Available | Negative | 1386642 - 1387454 | 30058.3 |
| dipeptidase d | SAMN04487898_103227 | Not Available | Negative | 1387512 - 1389011 | 54048.4 |
| dgtpase | SAMN04487898_103228 | Not Available | Negative | 1389062 - 1390405 | 50630.9 |
| sm-20-related protein | SAMN04487898_103229 | Not Available | Positive | 1390492 - 1391085 | 23113.5 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN04487898_103230 | Not Available | Negative | 1391082 - 1392128 | 37971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

