Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04487898_103211 | Not Available | Negative | 1370623 - 1372092 | 55448.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_103212 | Not Available | Negative | 1372111 - 1375410 | 124181.0 |
| fecr family protein | SAMN04487898_103213 | Not Available | Negative | 1375626 - 1376780 | 43111.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_103214 | Not Available | Negative | 1376883 - 1377614 | 28823.8 |
| hypothetical protein | SAMN04487898_103215 | Not Available | Positive | 1378479 - 1378754 | 10744.8 |
| hypothetical protein | SAMN04487898_103216 | Not Available | Positive | 1379037 - 1379399 | 13467.9 |
| hypothetical protein | SAMN04487898_103217 | Not Available | Positive | 1379602 - 1379850 | 9702.9 |
| fmn-dependent nadh-azoreductase | SAMN04487898_103218 | Not Available | Negative | 1379892 - 1380494 | 21841.5 |
| transcriptional regulator, hxlr family | SAMN04487898_103219 | Not Available | Positive | 1380606 - 1380983 | 14267.4 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04487898_103220 | Not Available | Negative | 1381083 - 1381718 | 23192.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

