Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN04487898_103191 | Not Available | Negative | 1339946 - 1340386 | 17189.7 |
| amino acid adenylation domain-containing protein | SAMN04487898_103192 | Not Available | Negative | 1340409 - 1343096 | 101468.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04487898_103193 | Not Available | Negative | 1343547 - 1344980 | 53279.9 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04487898_103194 | Not Available | Negative | 1344967 - 1348143 | 116052.0 |
| membrane fusion protein, multidrug efflux system | SAMN04487898_103195 | Not Available | Negative | 1348165 - 1349247 | 40259.4 |
| dinb superfamily protein | SAMN04487898_103196 | Not Available | Negative | 1349355 - 1349849 | 18942.6 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04487898_103197 | Not Available | Negative | 1349886 - 1351349 | 54783.2 |
| acetyltransferase (gnat) family protein | SAMN04487898_103198 | Not Available | Positive | 1351518 - 1351973 | 17836.3 |
| fad dependent oxidoreductase | SAMN04487898_103199 | Not Available | Negative | 1352030 - 1353907 | 70044.4 |
| acetyl esterase/lipase | SAMN04487898_103200 | Not Available | Negative | 1353934 - 1354836 | 32885.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

