Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN04487898_103181 | Not Available | Negative | 1328209 - 1329261 | 40473.4 |
| glutamate-5-semialdehyde dehydrogenase | SAMN04487898_103182 | Not Available | Negative | 1329468 - 1330715 | 45652.1 |
| glutamate 5-kinase | SAMN04487898_103183 | Not Available | Negative | 1330719 - 1331753 | 37159.0 |
| asma family protein | SAMN04487898_103184 | Not Available | Negative | 1331859 - 1334297 | 89433.6 |
| malate dehydrogenase (quinone) | SAMN04487898_103185 | Not Available | Negative | 1334390 - 1335898 | 55466.9 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487898_103186 | Not Available | Positive | 1336123 - 1336614 | 18358.3 |
| dna-binding transcriptional regulator, marr family | SAMN04487898_103187 | Not Available | Positive | 1336611 - 1337075 | 17899.0 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04487898_103188 | Not Available | Positive | 1337198 - 1337692 | 19571.0 |
| Trna-thr | Not Available | Not Available | Positive | 1338027 - 1338099 | Not Available |
| hypothetical protein | SAMN04487898_103190 | Not Available | Positive | 1338189 - 1339982 | 66085.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

